Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_2447
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.1
pH	pH 9	-1.0
pH	pH 6	-0.9
pH	Valerolactone (C) pH 6.5	-0.8
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.8
carbon source	4-Aminobutyric 10 mM (C)	-0.7
pH	Growth at pH7 and (C) D-Glucose	-0.7
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.7
stress	MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM	-0.7
carbon source	DL-3-Hydroxyisobutyric (C)	-0.7
carbon source	carbon source 4-vinylphenol 0.1 mM	-0.7
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.7
stress	MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL	-0.7
pH	Growth at pH9 and (C) Trisodium citrate	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	-0.6
temperature shift	Temperature shift 10_to_21	-0.6
temperature shift	Temperature shift 30_to_4; with MOPS	-0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.6
carbon source	carbon source Glycerol 108.6 mM	-0.6
nitrogen source	NAG (N); with MOPS	-0.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days	+0.6
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.6
micoeukaryotes	C.elegans, mixed culture-2	+0.6
carbon source	Rhamnogalacturonan - from potato (C)	+0.6
phage	P. putida Sci small MOI 0.1	+0.7
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	+0.8
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.8
phage	P. put PUT 10 MOI 10	+0.9
nitrogen source	NAG (N); with MOPS	+0.9
		remove PP_2447