Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_2442
phage PUT 8 MOI 1 -5.2
nitrogen source Ammonium chloride (N) -5.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -4.0
no stress control Growth with no stress -3.3
carbon source DL-3-Hydroxybutyric (C) -3.1
nitrogen source NAG (N); with MOPS -2.8
pH pH 8 -2.3
agar plate interaction control Parafilmed volatile agar plate with no fungus -2.3
pH D-Glucose (C) pH 7 -2.2
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -2.1
micoeukaryotes Tetrahymena sp., Mixed culture-2 -2.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -2.1
pH pH 4 -2.0
stress MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL -1.9
stress MOPS minimal media_Glucose20mM with Lithium chloride 200 mM -1.9
temperature shift Temperature shift 30_to_21; with MOPS -1.9
carbon source ferulate (C); with MOPS -1.8
temperature shift Temperature shift 30_to_4 -1.8
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM -1.8
carbon source DL-3-Hydroxyisobutyric (C) -1.7
stress MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL -1.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.7
stress MOPS minimal media_Glucose20mM with Chloride 200 mM -1.7
carbon source carbon source 4-vinylphenol 0.1 mM -1.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.7
stress Cholinium glutamate 10 vol% -1.7
carbon source carbon source Glycerol 108.6 mM -1.7
micoeukaryotes Dictyostellum sp.mixed culture-1 -1.7
pH Growth at pH8 and (C) D-Glucose -1.6
r2a control with 0.2% methanol R2A control with 0.2% methanol -1.6
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PP_2442