Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_2437
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.6
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.4
carbon source ferulate (C); with MOPS -1.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -1.3
micoeukaryotes C.elegans, mixed culture-1 -1.3
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.3
pH Valerolactone (C) pH 6.5 -1.2
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.2
micoeukaryotes Acanthamoeba sp., muxed culture-2 -1.2
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.2
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -1.1
pH Valerolactone (C) pH 6.5 -1.1
carbon source DL-2-Aminoadipic 10 mM (C) -1.1
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.1
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.1
carbon source ferulate (C); with MOPS -1.0
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -1.0
carbon source 1,3-Hexanediol (C) +1.0
carbon source Hexanoic (C) +1.1
carbon source 3-Hydroxydecanoic (C) +1.1
carbon source Ethyl decanoate (C) +1.1
carbon source 1,3-Hexanediol (C) +1.1
carbon source 4-Hydroxyvalerate (C) (40mM) +1.4
carbon source 4-Hydroxyvalerate (C) (40mM) +1.4
carbon source 5-Hydroxydodecanoate (C) +1.5
carbon source 5-Hydroxydodecanoate (C) +1.6
carbon source Valeric (C) +1.7
carbon source Hexanoic (C) +1.8
carbon source 3-Hydroxyhexanoic (C) +1.9
carbon source 3-Hydroxyhexanoic (C) +2.0
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PP_2437