Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_2416
phage	P. putida Sci small MOI 0.1	-5.7
carbon source	ferulate (C); with MOPS	-4.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days	-2.8
nitrogen source	2,6-diaminopimelic (N)	-2.6
temperature	Growth at 25C	-2.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-2.2
pH	pH 6	-2.0
carbon source	Nonanoic (C)	-1.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.4
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.4
carbon source	propionate (C)	-1.4
carbon source	L-Leucine (C)	-1.4
nitrogen source	nitrogen source nitrate 5mM	-1.3
carbon source	ferulate (C); with MOPS	-1.3
anaerobic m9	anaerobic M9	-1.3
pH	Growth at pH8 and (C) Trisodium citrate	-1.3
temperature shift	Temperature shift 30_to_25; with MOPS	-1.2
temperature shift	Temperature shift 10_to_30; with MOPS	-1.2
carbon source	D-Glucose (C)	-1.2
temperature	Growth at 25C; with MOPS	-1.2
carbon source	butyrate (C)	-1.2
temperature shift	Temperature shift 10_to_21; with MOPS	-1.2
phage	P. put South MOI 10	-1.2
pH	Valerolactone (C) pH 6.5	-1.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+1.2
pH	pH 4	+1.2
carbon source	carbon source D-Glucose 55.5 mM	+1.3
carbon source	carbon source Bisabolol 45 mM	+1.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	+1.5
pH	pH 9	+1.6
		remove PP_2416