Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

Or view all 989 experiments or choose conditions

Group	Condition	PP_2406
carbon source	Quinic Acid (C)	-2.1
carbon source	Quinic Acid (C)	-2.0
phage	P. putida PUT 7 MOI 1	-1.3
carbon source	ferulate (C); with MOPS	-1.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.9
carbon source	carbon source D-Glucose 55.5 mM	-0.8
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.8
carbon source	3-methyl-1-butanol 0.1 vol% (C)	-0.7
phage	P. putida Sci small MOI 0.1	-0.7
carbon source	carbon source 3-O-methyl-glucose 10 mM	-0.7
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	-0.7
stress	MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM	-0.6
pH	Growth at pH7 and (C) Trisodium citrate	-0.6
carbon source	Myristic (C)	-0.6
nitrogen source	Urea (N)	-0.6
stress	MOPS minimal media_Glucose20mM with Lithium chloride 200 mM	-0.6
pH	Growth at pH6 and (C) D-Glucose	-0.6
carbon source	Vanillin (C)	-0.6
carbon source	Valeric (C)	-0.6
phage	P. putida PUT10 MOI 10	-0.6
r2a control with 0.2% methanol	R2A control with 0.2% methanol	-0.6
nitrogen source	TNT (N)	+0.6
stress	Growth with Chloride 500 mM; with MOPS	+0.6
nitrogen source	Ammonium chloride and TNT (N)	+0.7
temperature	Growth at 25C	+0.7
carbon source	L-Leucine (C)	+0.7
nitrogen source	Ammonium chloride (N)	+0.7
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	+0.8
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.4
		remove PP_2406