Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_2405
phage	P. putida Sci small MOI 0.1	-0.9
carbon source	ferulate (C); with MOPS	-0.8
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	-0.7
nitrogen source	Propiolactam (N)	-0.6
pH	Growth at pH6 and (C) Trisodium citrate	-0.6
phage	P. putida Sci Big MOI 0.1	-0.6
carbon source	L-Lysine 10 mM (C)	-0.5
carbon source	1,3-Butandiol (C)	-0.5
temperature shift	Temperature shift 30_to_21	-0.5
carbon source	Delta-Nonalactone (C)	-0.5
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-0.5
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.5
carbon source	L-tyrosine 5 mM (C)	-0.5
nitrogen source	D-2-Aminobutyric (N)	-0.4
carbon source	D-Glucose (C)	-0.4
carbon source	D-Glucose (C); with MOPS	-0.4
temperature shift	Temperature shift 30_to_25; with MOPS	-0.4
carbon source	L-tyrosine 5 mM (C)	-0.4
nitrogen source	D-2-Aminobutyric (N)	-0.4
temperature shift	Temperature shift 30_to_34; with MOPS	-0.4
pH	Growth at pH6 and (C) D-Glucose	-0.4
r2a control with 0.2x vogels	R2A control with 0.2X Vogels	+0.4
carbon source	Vanillic Acid (C)	+0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	+0.5
nitrogen source	nitrogen source nitrite 0.5mM	+0.5
micoeukaryotes	Tetrahymena sp., Mixed culture-2	+0.5
carbon source	Tween 20 (C)	+0.5
stress	R2A with Fusaric 480 ug/mL	+0.5
pH	pH 9	+0.5
carbon source	L-Leucine (C)	+0.6
		remove PP_2405