Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_2372
stress Geraniol 1 vol% -1.1
carbon source Sorghum Hydrolysate (C) -0.9
micoeukaryotes Tetrahymena sp., Mixed culture-2 -0.7
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6
carbon source Sorghum Hydrolysate (C) -0.6
micoeukaryotes Tetrahymena sp., Mixed culture-1 -0.5
micoeukaryotes C.elegans, mixed culture-1 -0.5
phage PUT8 MOI 0.1 -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5
lb LB -0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.5
carbon source Soil Extract with D-Glucose 10 mM; 30C; then outgrowth in LB -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.4
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.4
micoeukaryotes Acanthamoeba sp., muxed culture-2 -0.4
phage P. put South MOI 10 -0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.4
carbon source D-Glucose (C) with 20AA_mix_minus_Gly -0.4
carbon source D-Glucose (C); with MOPS -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.3
carbon source Soil Extract with D-Glucose 10 mM; 30C; then outgrowth in LB -0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.3
nitrogen source nitrogen source nitrate 5mM +0.3
carbon source Lauric (C) +0.3
stress Growth with Chloride 500 mM; with MOPS +0.3
temperature shift Temperature shift 10_to_30 +0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.4
carbon source ferulate (C); with MOPS +0.5
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PP_2372