Fitness for 1 genes in Pseudomonas putida KT2440

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Top 30 experiments (either direction), sorted by average fitness

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Group Condition PP_2355
phage P. putida Missley MOI 0.1 -1.6
phage P. putida Sci small MOI 0.1 -1.4
pH pH 7 -1.3
carbon source Valeric (C) -1.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -1.2
carbon source ferulate (C); with MOPS -1.1
carbon source L-Leucine (C) -1.1
carbon source ferulate (C); with MOPS -0.9
carbon source ferulate (C); with MOPS -0.9
phage P. putida PUT 7 MOI 1 -0.8
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.8
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.8
r2a control with 0.2% methanol R2A control with 0.2% methanol -0.8
carbon source D-Glucose (C) -0.8
stress R2A with Polymyxin B sulfate 0.001 mg/ml -0.8
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.8
temperature Growth at 10C; with MOPS -0.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.7
phage P. putida Sci Big MOI 0.1 -0.7
r2a control with 0.2% methanol R2A control with 0.2% methanol -0.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.7
pH Growth at pH6 and (C) D-Glucose -0.6
phage P. putida PUT10 MOI 1 -0.6
stress R2A with Polymyxin B sulfate 0.001 mg/ml -0.6
nitrogen source nitrogen source nitrite 0.5mM +0.6
temperature Growth at 30C; with MOPS +0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7
nitrogen source Urea (N) +0.8
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0
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PP_2355