Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_2311
nitrogen source	nitrogen source nitrite 0.5mM	-2.5
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	-1.2
lb outgrowth control more dilute start	LB outgrowth control more dilute start	-1.0
phage	P. put South MOI 10	-0.9
phage	P. putida Sci Big MOI 0.1	-0.9
carbon source	carbon source 4-vinylphenol 0.01 mM	-0.9
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.8
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	-0.8
r2a control with 0.2x vogels	R2A control with 0.2X Vogels	-0.8
stress	R2A with Fusaric 480 ug/mL	-0.8
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.8
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.8
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	-0.8
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.8
temperature shift	Temperature shift 30_to_21; with MOPS	-0.8
carbon source	Valerolactone (C)	-0.8
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	-0.7
phage	P. put PUT 10 MOI 1	+0.7
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	+0.7
nitrogen source	Urea (N); with MOPS	+0.7
nitrogen source	Ammonium chloride (N)	+0.8
temperature shift	Temperature shift 10_to_30	+0.8
stress	Growth with Chloride 500 mM	+0.8
temperature shift	Temperature shift 30_to_25; with MOPS	+0.8
pH	Growth at pH9 and (C) Trisodium citrate	+0.9
temperature shift	Temperature shift 30_to_34; with MOPS	+0.9
pH	Growth at pH6 and (C) Trisodium citrate	+1.0
carbon source	D-Glucose (C)	+1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+1.0
		remove PP_2311