Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_2247
phage	P. putida Sci small MOI 0.1	-1.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-1.4
nitrogen source	NAG (N); with MOPS	-1.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.2
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-1.1
temperature shift	Temperature shift 30_to_4	-1.0
carbon source	Crotonic (C)	-1.0
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	-0.9
temperature shift	Temperature shift 30_to_25; with MOPS	-0.9
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	-0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.8
pH	Growth at pH8 and (C) Trisodium citrate	-0.8
temperature	Growth at 30C	-0.8
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs	-0.8
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	-0.8
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.8
reactor	48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO.	-0.8
carbon source	Heptanoic (C)	-0.8
pH	Growth at pH6 and (C) D-Glucose	-0.8
stress	2-Piperidinone 3 vol%	-0.7
stress	R2A with Polymyxin B sulfate 0.001 mg/ml	+0.7
pH	Growth at pH8 and (C) D-Glucose	+0.8
stress	MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL	+0.8
carbon source	Myristic (C)	+0.8
carbon source	carbon source Bisabolene 48.9 mM	+0.9
carbon source	carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM	+0.9
carbon source	2,3-Butanediol (C)	+0.9
carbon source	L-Leucine (C)	+1.0
phage	P. putida Missley MOI 0.1	+1.0
phage	P. putida Sci Big MOI 0.1	+1.3
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