Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_2237
carbon source Trisodium citrate (C) -0.4
carbon source Valeric (C) -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4
stress R2A with Polymyxin B sulfate 0.001 mg/ml -0.3
stress Cholinium lysinate 10 vol% -0.3
phage PUT 8 MOI 1 -0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.3
carbon source L-Phenylalanine 5 mM (C) -0.3
phage PUT8 MOI 0.1 -0.3
carbon source D-Glucose (C) -0.3
nitrogen source Urea (N) -0.2
carbon source D-Glucose (C) 1.25 mM -0.2
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.2
temperature shift Temperature shift 30_to_10; with MOPS -0.2
stress MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL +0.2
nitrogen source 2,6-diaminopimelic (N) +0.2
carbon source ferulate (C); with MOPS +0.2
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.3
lb LB +0.3
pH Valerolactone (C) pH 6.5 +0.3
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3
stress MOPS minimal media_Glucose20mM with Poly(3-hydroxybutyric) 0.1 mg/mL +0.3
pH pH 9 +0.3
nitrogen source nitrogen source nitrite 0.5mM +0.3
carbon source ferulate (C); with MOPS +0.3
carbon source ferulate (C); with MOPS +0.3
carbon source Delta-Decalactone (C) +0.3
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4
phage P. putida Missley MOI 0.1 +0.4
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PP_2237