Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_2227
nitrogen source	Propandiamine (N)	-2.0
pH	Growth at pH6 and (C) D-Glucose	-1.8
nitrogen source	Urea (N)	-1.3
pH	Growth at pH9 and (C) D-Glucose	-1.3
nitrogen source	nitrogen source nitrite 0.5mM	-1.2
temperature	Growth at 25C	-1.2
nitrogen source	spermidine (N)	-1.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.0
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.9
carbon source	D-Glucuronic gamma lactone (C)	-0.8
pH	Growth at pH7 and (C) D-Glucose	-0.8
nitrogen source	D-2-Aminobutyric (N)	-0.8
nitrogen source	2,6-diaminopimelic (N)	-0.8
carbon source	Myristic (C)	-0.7
temperature shift	Temperature shift 30_to_34	-0.7
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	-0.7
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	+0.7
phage	P. put South MOI 0.1	+0.7
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.7
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM	+0.7
temperature shift	Temperature shift 30_to_4; with MOPS	+0.7
carbon source	Delta-Decalactone (C)	+0.7
pH	Growth at pH6 and (C) Trisodium citrate	+0.8
phage	P. putida South MOI 10	+0.8
carbon source	D-Glucose (C); with MOPS	+0.8
stress	Growth with Chloride 500 mM; with MOPS	+0.8
mixed community	Putida_ML5X with Paraburkholderia sabiae T6SS mutant	+0.8
carbon source	3-Hydroxydecanoic (C)	+0.8
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM	+0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+1.0
		remove PP_2227