Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_2217
carbon source	3-Methyl-2-Oxobutanoic Acid (C)	-7.7
carbon source	L-Isoleucine (C)	-7.0
carbon source	2-methyl-1-butanol (C)	-6.3
carbon source	L-Isoleucine (C)	-5.6
carbon source	3-Methyl-2-Oxobutanoic Acid (C)	-5.5
pH	Growth at pH9 and (C) D-Glucose	-5.4
carbon source	2-Methylbutanoic (C)	-5.2
carbon source	2-Methylbutanoic (C)	-5.2
carbon source	2-methyl-1-butanol (C)	-5.0
micoeukaryotes	Tetrahymena sp., Mixed culture-2	-4.6
carbon source	L-Leucine (C)	-4.6
carbon source	L-Valine (C)	-4.5
carbon source	Beta-alanine (C)	-4.5
nitrogen source	L-Isoleucine (N)	-4.2
carbon source	L-Valine (C)	-4.2
carbon source	butyrate (C)	-4.0
nitrogen source	Urea (N); with MOPS	-3.9
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs	-3.8
nitrogen source	L-Isoleucine (N)	-3.8
micoeukaryotes	C.elegans, mixed culture-1	-3.6
carbon source	4-Hydroxyvalerate (C) (40mM)	-3.6
carbon source	butyrate (C)	-3.5
carbon source	3-methyl-1-butanol 0.1 vol% (C)	-3.5
carbon source	L-Valine (C)	-3.5
nitrogen source	Urea (N)	-3.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	-3.4
nitrogen source	L-Valine (N)	-3.3
carbon source	butyrate (C)	-3.2
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	-3.0
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-3.0
		remove PP_2217