Fitness for 1 genes in Pseudomonas putida KT2440

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Top 30 experiments (either direction), sorted by average fitness

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Group Condition PP_2214
carbon source 2-methyl-1-butanol (C) -6.6
carbon source L-Isoleucine (C) -5.7
carbon source L-Isoleucine (C) -4.7
carbon source 2-methyl-1-butanol (C) -4.5
nitrogen source L-Isoleucine (N) -3.9
nitrogen source L-Isoleucine (N) -3.8
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -3.8
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -3.5
nitrogen source DL-2-Aminobutyric (N) -3.5
carbon source 2-Methylbutanoic (C) -3.5
carbon source 2-Methylbutanoic (C) -3.3
nitrogen source D-2-Aminobutyric (N) -3.2
nitrogen source DL-2-Aminobutyric (N) -3.1
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -3.1
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -3.0
carbon source L-Valine (C) -2.9
carbon source Beta-alanine (C) -2.9
micoeukaryotes C.elegans, mixed culture-2 -2.8
carbon source Delta-Decalactone (C) -2.8
carbon source 3-Methyl-2-Oxobutanoic Acid (C) -2.8
micoeukaryotes Tetrahymena sp., Mixed culture-1 -2.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -2.7
nitrogen source D-2-Aminobutyric (N) -2.7
carbon source Delta-Decalactone (C) -2.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -2.7
carbon source 3-methyl-2-oxopentanoic (C) -2.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -2.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -2.5
carbon source L-Valine (C) -2.5
carbon source Valeric (C) +3.1
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PP_2214