Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_2213
carbon source 2-Methylbutanoic (C) -4.8
carbon source 2-Methylbutanoic (C) -4.8
carbon source 2-methyl-1-butanol (C) -3.4
carbon source L-Isoleucine (C) -3.2
carbon source L-Isoleucine (C) -3.0
carbon source 2-methyl-1-butanol (C) -3.0
nitrogen source D-2-Aminobutyric (N) -1.7
nitrogen source D-2-Aminobutyric (N) -1.3
carbon source 3-methyl-2-oxopentanoic (C) -1.3
nitrogen source L-Isoleucine (N) -1.1
carbon source 3-methyl-2-oxopentanoic (C) -0.9
nitrogen source L-Isoleucine (N) -0.9
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.8
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.8
nitrogen source DL-2-Aminobutyric (N) -0.7
nitrogen source DL-2-Aminobutyric (N) -0.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.7
temperature shift Temperature shift 30_to_21; with MOPS -0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.6
carbon source carbon source D-Glucose 55.5 mM -0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.5
carbon source 3-Methyl-2-Oxobutanoic Acid (C) -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.5
nitrogen source NAG (N); with MOPS +0.5
carbon source 2,3-Butanediol (C) +0.5
carbon source 4-Methyl-2-oxopentanoic (C) +0.5
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5
temperature shift Temperature shift 10_to_30; with MOPS +0.6
carbon source 4-Methyl-2-oxopentanoic (C) +0.6
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PP_2213