Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_2210
phage	P. putida Sci small MOI 0.1	-1.1
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-1.1
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	-1.1
supernatant	Supernatant; Burkholderia bryophila 376MFSha3.1 spent media 0.5x	-1.0
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	-0.9
temperature shift	Temperature shift 10_to_25; with MOPS	+0.9
carbon source	4-Hydroxybenzoic Acid (C)	+1.0
carbon source	Valeric (C)	+1.1
carbon source	carbon source Bisabolene 48.9 mM	+1.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.5
carbon source	Valeric (C)	+1.5
carbon source	Valeric (C)	+1.5
carbon source	carbon source D-Glucose 55.5 mM	+1.6
carbon source	propionate (C)	+1.6
carbon source	carbon source 2-Deoxy-D-glucose 10 mM	+1.6
carbon source	carbon source 2-Deoxy-D-glucose 100 mM	+1.6
pH	pH 7	+1.7
pH	pH 9	+1.7
carbon source	carbon source 4-vinylphenol 0.01 mM	+1.8
carbon source	carbon source Glycerol 108.6 mM	+1.9
pH	pH 5	+1.9
pH	pH 6	+2.0
carbon source	carbon source 3-O-methyl-glucose 50 mM	+2.0
pH	pH 8	+2.0
carbon source	carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM	+2.0
pH	pH 4	+2.0
carbon source	carbon source Bisabolol 45 mM	+2.1
carbon source	carbon source 4-vinylphenol 0.1 mM	+2.1
carbon source	carbon source 2-Deoxy-D-glucose 50 mM	+2.1
carbon source	carbon source 3-O-methyl-glucose 10 mM	+2.2
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