Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_2209
phage	P. putida Sci Big MOI 0.1	-0.9
no stress control	Growth with no stress	-0.8
carbon source	carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM	-0.7
carbon source	carbon source 3-O-methyl-glucose 50 mM	-0.7
carbon source	3-methyl-1-butanol 0.1 vol% (C)	-0.6
phage	P. putida PUT 7 MOI 1	-0.6
carbon source	3-Hydroxydecanoic (C)	-0.6
stress	R2A with Fusaric 240 ug/mL	-0.6
carbon source	Ethyl decanoate and D-Glucose (C)s	-0.5
carbon source	Myristic (C)	-0.5
pH	Growth at pH6 and (C) D-Glucose	-0.5
carbon source	L-tyrosine 5 mM (C)	-0.5
carbon source	Nonanoic (C)	-0.5
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.5
nitrogen source	2,6-diaminopimelic (N)	-0.5
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM	-0.5
carbon source	D-Glucose (C)	-0.5
temperature shift	Temperature shift 30_to_34; with MOPS	+0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	+0.5
pH	LB 0.1x with 55.5 mM D-Glucose; pH 4.6	+0.5
r2a control with 0.2% methanol	R2A control with 0.2% methanol	+0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs	+0.5
pH	Growth at pH8 and (C) D-Glucose	+0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	+0.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days	+0.5
phage	PUT8 MOI 10	+0.6
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.6
nitrogen source	NAG (N); with MOPS	+0.7
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	+0.9
stress	R2A with Fusaric 480 ug/mL	+0.9
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