Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_2184
phage	P. putida Sci Big MOI 0.1	-0.7
phage	P. putida PUT 7 MOI 1	-0.4
temperature shift	Temperature shift 10_to_30	-0.4
temperature shift	Temperature shift 30_to_21; with MOPS	-0.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.3
nitrogen source	no extra (N); with MOPS	-0.3
carbon source	D-Glucose (C)	-0.3
temperature shift	Temperature shift 30_to_10; with MOPS	-0.3
nitrogen source	nitrogen source nitrite 0.5mM	-0.3
nitrogen source	Urea (N)	-0.3
phage	P. putida Sci small MOI 0.1	-0.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.2
nitrogen source	NAG (N); with MOPS	-0.2
carbon source	ferulate (C); with MOPS	-0.2
pH	Growth at pH7 and (C) D-Glucose	-0.2
pH	Growth at pH6 and (C) Trisodium citrate	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.2
carbon source	DL-2-Aminoadipic 10 mM (C)	-0.2
micoeukaryotes	Tetrahymena sp., Mixed culture-2	-0.2
carbon source	D-Lysine 10 mM (C)	-0.2
temperature	Growth at 34C	-0.2
nitrogen source	NAG (N)	-0.2
carbon source	Valeric (C)	+0.2
carbon source	Tween 20 (C)	+0.2
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.2
nitrogen source	Caprolactam (N)	+0.2
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.2
pH	Valerolactone (C) pH 6.5	+0.2
nitrogen source	D-2-Aminobutyric (N)	+0.3
r2a control	R2A control	+0.3
		remove PP_2184