Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_2183
phage	P. putida Sci small MOI 0.1	-1.1
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.8
micoeukaryotes	Tetrahymena sp., Mixed culture-1	-0.8
carbon source	carbon source 3-O-methyl-glucose 50 mM	-0.7
nitrogen source	Urea (N)	-0.7
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.7
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.7
stress	Growth with Chloride 200 mM	-0.7
nitrogen source	nitrate (N)	-0.7
nitrogen source	2,6-diaminopimelic (N)	-0.7
nitrogen source	Ammonium chloride (N)	-0.6
reactor	72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO.	-0.6
nitrogen source	no extra (N); with MOPS	-0.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	-0.6
micoeukaryotes	Tetrahymena sp., Mixed culture-2	-0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.6
nitrogen source	Ammonium chloride (N)	-0.6
pH	Growth at pH8 and (C) Trisodium citrate	-0.6
pH	Growth at pH7 and (C) D-Glucose	-0.6
pH	Growth at pH6 and (C) D-Glucose	-0.5
carbon source	1,3-Butandiol (C)	-0.5
nitrogen source	D-2-Aminobutyric (N)	-0.5
no stress control	Growth with no stress	-0.5
pH	pH 8	+0.5
pH	Growth at pH7 and (C) Trisodium citrate	+0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	+0.5
phage	P. putida South MOI 10	+0.5
nitrogen source	Propiolactam (N)	+0.5
carbon source	Ethanol (C)	+0.5
nitrogen source	D-2-Aminobutyric (N)	+1.0
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