Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_2180
nitrogen source	Cadaverine (N)	-1.3
nitrogen source	1,6-Hexanediamine (N)	-1.3
nitrogen source	Cadaverine (N)	-1.2
nitrogen source	1,6-Hexanediamine (N)	-1.2
micoeukaryotes	C.elegans, mixed culture-1	-0.6
phage	PUT 8 MOI 1	-0.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.4
carbon source	Myristic (C)	-0.4
carbon source	ferulate (C); with MOPS	-0.4
phage	P. put South MOI 10	-0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	-0.4
pH	Growth at pH9 and (C) Trisodium citrate	-0.4
nitrogen source	nitrogen source nitrite 0.5mM	-0.4
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM	-0.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	-0.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	-0.3
phage	P. putida PUT 7 MOI 1	+0.3
carbon source	Succinic Acid (C)	+0.3
pH	Growth at pH7 and (C) Trisodium citrate	+0.4
phage	PUT8 MOI 10	+0.4
carbon source	2-Methylbutanoic (C)	+0.4
phage	P. putida Sci small MOI 0.1	+0.4
nitrogen source	NAG (N); with MOPS	+0.4
nitrogen source	D-2-Aminobutyric (N)	+0.4
nitrogen source	no extra (N); with MOPS	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.4
carbon source	D-Glucose (C); with MOPS	+0.5
stress	Growth with Chloride 500 mM; with MOPS	+0.5
pH	pH 8	+0.5
nitrogen source	D-2-Aminobutyric (N)	+0.9
		remove PP_2180