Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_2169
nitrogen source NAG (N); with MOPS -1.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.3
temperature shift Temperature shift 30_to_4 -1.2
temperature Growth at 30C; with MOPS -1.2
nitrogen source D-2-Aminobutyric (N) -1.1
stress MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL -1.1
carbon source D-Glucose (C) with 20AA_mix_minus_Thr -1.0
temperature shift Temperature shift 30_to_4; with MOPS -1.0
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -1.0
temperature shift Temperature shift 30_to_4 -0.9
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.9
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.9
carbon source L-Leucine (C) -0.9
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.8
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.8
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.8
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8
phage P. putida PUT10 MOI 10 +0.8
phage P. put PUT 10 MOI 1 +0.8
phage P. put South MOI 0.1 +0.8
pH Valerolactone (C) pH 6.5 +0.9
phage P. putida PUT10 MOI 10 +0.9
pH Growth at pH8 and (C) D-Glucose +0.9
phage P. put PUT 10 MOI 10 +1.0
phage PUT8 MOI 0.1 +1.0
phage P. put PUT 10 MOI 0.1 +1.0
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PP_2169