Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_2157
carbon source	L-Phenylalanine 5 mM (C)	-0.7
carbon source	D-Fructose (C)	-0.5
phage	P. putida PUT 7 MOI 1	-0.5
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM	-0.5
carbon source	ferulate (C); with MOPS	-0.5
carbon source	2-Methylbutanoic (C)	-0.4
nitrogen source	nitrogen source nitrite 0.5mM	-0.4
stress	R2A with Fusaric 240 ug/mL	-0.4
phage	P. put South MOI 10	-0.4
nitrogen source	nitrogen source nitrate 5mM	-0.4
carbon source	BC Lignin Sorghum 10 vol% (C)	-0.4
stress	R2A with Polymyxin B sulfate 0.001 mg/ml	+0.4
r2a control with 0.2x vogels	R2A control with 0.2X Vogels	+0.4
temperature shift	Temperature shift 30_to_25; with MOPS	+0.4
nitrogen source	nitrate (N)	+0.4
reactor	72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v oleyl alcohol overlay	+0.4
pH	Growth at pH6 and (C) D-Glucose	+0.4
temperature shift	Temperature shift 30_to_34; with MOPS	+0.4
temperature shift	Temperature shift 30_to_10; with MOPS	+0.4
stress	Growth with Chloride 200 mM; with MOPS	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.4
carbon source	carbon source 2-Deoxy-D-glucose 100 mM	+0.4
temperature	Growth at 30C; with MOPS	+0.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.4
stress	R2A with Fusaric 480 ug/mL	+0.5
carbon source	carbon source 3-O-methyl-glucose 50 mM	+0.5
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.5
pH	Growth at pH7 and (C) Trisodium citrate	+0.5
no stress control	Growth with no stress	+0.5
		remove PP_2157