Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_2150
nitrogen source	NAG (N); with MOPS	-1.5
nitrogen source	nitrogen source nitrate 5mM	-0.9
nitrogen source	nitrate (N)	-0.9
carbon source	DL-3-Hydroxyisobutyric (C)	-0.8
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.8
phage	P. putida Sci small MOI 0.1	-0.8
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	-0.8
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.8
pH	pH 8	-0.7
nitrogen source	Ammonium chloride (N)	-0.7
micoeukaryotes	C.elegans, mixed culture-2	-0.7
pH	Growth at pH6 and (C) D-Glucose	-0.7
carbon source	1,3-Hexanediol (C)	-0.7
temperature shift	Temperature shift 10_to_30; with MOPS	-0.7
no stress control	Growth with no stress	-0.7
pH	D-Glucose (C) pH 6	-0.6
carbon source	propionate (C)	-0.6
stress	R2A with Fusaric 120 ug/mL	-0.6
carbon source	ferulate (C); with MOPS	-0.6
phage	P. putida PUT10 MOI 10	+0.6
carbon source	Myristic (C)	+0.6
phage	P. putida South MOI 0.1	+0.6
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.7
phage	P. put South MOI 1	+0.7
temperature shift	Temperature shift 30_to_21; with MOPS	+0.7
reactor	24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO.	+0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.7
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.7
pH	Growth at pH9 and (C) Trisodium citrate	+0.7
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