Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_2128
temperature	Growth at 25C	-0.6
nitrogen source	nitrate (N)	-0.5
temperature shift	Temperature shift 30_to_25; with MOPS	-0.5
stress	R2A with Fusaric 240 ug/mL	-0.5
carbon source	4-Aminobutyric 10 mM (C)	-0.4
phage	P. putida South MOI 0.1	-0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.4
phage	P. put South MOI 10	-0.4
carbon source	D-Glucose (C)	-0.4
nitrogen source	Ammonium chloride (N); with MOPS	-0.4
reactor	48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO.	-0.4
temperature	Growth at 30C; with MOPS	-0.4
pH	Growth at pH8 and (C) D-Glucose	+0.4
pH	Growth at pH6 and (C) D-Glucose	+0.4
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.4
temperature	Growth at 30C	+0.4
nitrogen source	Urea (N)	+0.4
micoeukaryotes	Acanthamoeba sp., muxed culture-1	+0.4
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.4
stress	Growth with Chloride 500 mM	+0.4
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	+0.4
micoeukaryotes	C.elegans, mixed culture-2	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	+0.5
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM	+0.5
micoeukaryotes	Acanthamoeba sp., muxed culture-2	+0.5
nitrogen source	nitrogen source nitrite 1mM	+0.5
reactor	48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO.	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.5
carbon source	Delta-Decalactone (C)	+0.5
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