Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_2113
phage	P. putida Sci small MOI 0.1	-1.9
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.9
temperature shift	Temperature shift 30_to_21; with MOPS	-0.7
pH	Growth at pH7 and (C) D-Glucose	-0.7
temperature shift	Temperature shift 30_to_21; with MOPS	-0.7
pH	Growth at pH6 and (C) Trisodium citrate	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.6
carbon source	4-Methyl-2-oxopentanoic (C)	-0.6
carbon source	D-Glucose (C); with MOPS	-0.6
carbon source	L-Leucine (C)	-0.5
reactor	24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v dodecane overlay	-0.5
nitrogen source	Propiolactam (N)	-0.5
carbon source	DL-2-Aminoadipic 10 mM (C)	-0.5
temperature shift	Temperature shift 30_to_34	-0.5
nitrogen source	NAG (N)	-0.5
phage	PUT 8 MOI 1	-0.5
temperature	Growth at 10C; with MOPS	-0.5
reactor	72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v oleyl alcohol overlay	-0.5
carbon source	Trisodium citrate (C)	-0.5
supernatant	Supernatant; Paenibacillus sp. UNCCL52 spent media 0.5x	-0.5
temperature shift	Temperature shift 10_to_34	-0.5
nitrogen source	Ammonium chloride and TNT (N)	-0.5
carbon source	Crotonic (C)	-0.5
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.5
pH	pH 4	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.5
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.6
phage	P. putida Sci Big MOI 0.1	+0.6
nitrogen source	D-2-Aminobutyric (N)	+0.7
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