Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_2102
nitrogen source	D-2-Aminobutyric (N)	-1.0
nitrogen source	D-2-Aminobutyric (N)	-0.9
nitrogen source	DL-2-Aminobutyric (N)	-0.8
nitrogen source	DL-2-Aminobutyric (N)	-0.7
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.6
carbon source	3-methyl-1-butanol 0.25 vol% (C)	-0.5
r2a control with 0.2% methanol	R2A control with 0.2% methanol	-0.5
pH	Growth at pH6 and (C) Trisodium citrate	-0.4
stress	R2A with Fusaric 480 ug/mL	-0.4
phage	P. put South MOI 0.1	-0.4
micoeukaryotes	Tetrahymena sp., Mixed culture-2	-0.4
stress	Geraniol 1 vol%	-0.4
pH	pH 9	-0.4
carbon source	carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM	-0.4
nitrogen source	Ammonium chloride (N)	+0.4
phage	P. putida Missley MOI 0.1	+0.4
pH	Growth at pH7 and (C) Trisodium citrate	+0.4
carbon source	acetate (C)	+0.4
nitrogen source	nitrogen source nitrite 0.5mM	+0.4
pH	Growth at pH7 and (C) D-Glucose	+0.4
carbon source	4-Aminobutyric 10 mM (C)	+0.4
temperature	Growth at 25C	+0.4
nitrogen source	Propiolactam (N)	+0.4
carbon source	Valeric (C)	+0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.5
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.5
carbon source	D-Glucose (C); with MOPS	+0.6
pH	Growth at pH6 and (C) D-Glucose	+0.6
nitrogen source	nitrogen source nitrite 0.5mM	+0.6
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