Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_2056
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6
temperature shift Temperature shift 10_to_25; with MOPS -0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6
phage PUT 8 MOI 1 -0.6
carbon source Trisodium citrate (C) -0.5
phage P. putida PUT10 MOI 0.1 -0.5
nitrogen source nitrogen source Ammonium chloride 20mM -0.5
phage P. putida Sci small MOI 0.1 -0.4
nitrogen source nitrate (N) -0.4
temperature shift Temperature shift 30_to_10; with MOPS -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.4
carbon source 5-Aminovaleric 10 mM (C) -0.4
carbon source Phenylacetic (C) -0.4
temperature Growth at 25C +0.4
nitrogen source nitrite (N) +0.4
carbon source Rhamnogalacturonan - from potato (C) +0.4
pH D-Glucose (C) pH 6 +0.4
carbon source Rhamnogalacturonan - from potato (C) +0.4
nitrogen source Hippuric (N) +0.4
nitrogen source no extra (N); with MOPS +0.4
carbon source ferulate (C); with MOPS +0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.5
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM +0.5
carbon source carbon source Glycerol 108.6 mM +0.5
carbon source ferulate (C); with MOPS +0.7
carbon source acetate (C) +0.9
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9
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PP_2056