Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_2051
phage	P. putida PUT 7 MOI 1	-0.9
carbon source	acetate (C)	-0.6
carbon source	1,4-Butanediol (C)	-0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	-0.5
nitrogen source	2,6-diaminopimelic (N)	-0.5
nitrogen source	D-2-Aminobutyric (N)	-0.5
carbon source	1,4-Butanediol (C)	-0.4
pH	pH 7	-0.4
pH	Growth at pH6 and (C) D-Glucose	-0.4
phage	PUT8 MOI 0.1	-0.4
phage	P. putida Sci Big MOI 0.1	-0.4
temperature	Growth at 25C	-0.4
nitrogen source	Ammonium chloride (N)	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.3
stress	R2A with Fusaric 120 ug/mL	-0.3
phage	P. putida PUT10 MOI 10	-0.3
phage	PUT8 MOI 10	-0.3
carbon source	3-Hydroxydecanoic (C)	-0.3
carbon source	carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM	-0.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.3
carbon source	Nonanoic (C)	-0.3
reactor	24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v dodecane overlay	+0.3
no stress control	Growth with no stress	+0.3
micoeukaryotes	C.elegans, mixed culture-2	+0.3
stress	Growth with Chloride 500 mM; with MOPS	+0.4
carbon source	Trisodium citrate (C)	+0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	+0.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.5
carbon source	Myristic (C)	+0.5
carbon source	L-Leucine (C)	+0.5
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