Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_2050
phage	P. putida Missley MOI 0.1	-1.0
carbon source	Myristic (C)	-1.0
phage	P. putida PUT 7 MOI 1	-0.9
carbon source	carbon source 4-vinylphenol 0.01 mM	-0.8
nophagecontrol	No phage control	-0.7
phage	P. putida Sci Big MOI 0.1	-0.7
nitrogen source	2,6-diaminopimelic (N)	-0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.7
carbon source	Ethyl decanoate and D-Glucose (C)s	-0.7
temperature shift	Temperature shift 10_to_30; with MOPS	-0.6
phage	P. putida Sci small MOI 0.1	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.6
nitrogen source	D-2-Aminobutyric (N)	-0.6
carbon source	Levulinic Acid (C)	-0.6
nitrogen source	2,6-diaminopimelic (N)	-0.6
r2a control with 0.2% methanol	R2A control with 0.2% methanol	-0.5
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.6
stress	R2A with Polymyxin B sulfate 0.001 mg/ml	+0.6
carbon source	Tween 20 (C)	+0.6
carbon source	carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM	+0.6
pH	D-Glucose (C) pH 6	+0.6
carbon source	1,4-Butanediol (C)	+0.6
carbon source	butyrate (C)	+0.6
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.7
nitrogen source	Ammonium chloride and TNT (N)	+0.7
carbon source	1,4-Butanediol (C)	+0.7
temperature	Growth at 25C; with MOPS	+0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.8
carbon source	Tween 20 (C)	+0.8
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	+0.8
		remove PP_2050