Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_2003
nitrogen source	Propandiamine (N)	-1.4
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.3
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM	-1.3
stress	Geraniol 1 vol%	-1.1
pH	Growth at pH9 and (C) Trisodium citrate	-1.0
phage	PUT 8 MOI 1	-1.0
phage	P. putida Sci Big MOI 0.1	-1.0
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	-1.0
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.9
r2a control with 0.2x vogels	R2A control with 0.2X Vogels	-0.9
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.9
stress	MOPS minimal media_Glucose20mM with Chloride 200 mM	-0.9
phage	P. put South MOI 1	-0.9
carbon source	butyrate (C)	-0.8
nitrogen source	NAG (N); with MOPS	-0.8
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.8
phage	P. putida PUT 7 MOI 1	-0.8
carbon source	Lignin Monomers (C)	-0.8
pH	Growth at pH7 and (C) Trisodium citrate	+0.8
pH	Growth at pH6 and (C) Trisodium citrate	+0.8
carbon source	carbon source 4-vinylphenol 0.01 mM	+0.8
temperature shift	Temperature shift 30_to_21; with MOPS	+0.9
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	+0.9
carbon source	carbon source 4-vinylphenol 0.1 mM	+0.9
no stress control	Growth with no stress	+0.9
temperature	Growth at 30C	+1.0
carbon source	D-Glucose (C)	+1.0
no stress control	Growth with no stress	+1.0
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+1.0
pH	pH 7	+1.0
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