Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_1967
nitrogen source Propandiamine (N) -1.0
carbon source Trisodium citrate (C) -0.7
phage P. putida Missley MOI 0.1 -0.7
carbon source DL-3-Hydroxybutyric (C) -0.6
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6
nitrogen source D-2-Aminobutyric (N) -0.6
carbon source Valerolactone (C) -0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6
stress R2A with Fusaric 480 ug/mL -0.6
stress Formaldehyde 0.03125 vol% -0.6
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5
carbon source L-Lysine 10 mM (C) -0.5
micoeukaryotes Acanthamoeba sp., muxed culture-2 -0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.5
nitrogen source Urea (N); with MOPS +0.5
nitrogen source nitrate (N) +0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.5
pH Growth at pH8 and (C) D-Glucose +0.5
temperature shift Temperature shift 30_to_10; with MOPS +0.5
pH Growth at pH6 and (C) D-Glucose +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.6
carbon source pyruvate (C) +0.6
nitrogen source 2,6-diaminopimelic (N) +0.6
temperature shift Temperature shift 30_to_10; with MOPS +0.6
carbon source Hexanoic (C) +0.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.7
nitrogen source Imidazole (N) +0.7
carbon source 3-methyl-1-butanol 0.25 vol% (C) +0.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.8
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PP_1967