Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_1962
pH	Valerolactone (C) pH 6.5	-0.8
pH	Growth at pH7 and (C) Trisodium citrate	-0.7
micoeukaryotes	Tetrahymena sp., Mixed culture-2	-0.7
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	-0.6
carbon source	Trisodium citrate (C)	-0.6
carbon source	Octanoic (C)	-0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.5
micoeukaryotes	Tetrahymena sp., Mixed culture-1	-0.5
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.5
phage	P. put PUT 10 MOI 10	+0.5
pH	Growth at pH7 and (C) Trisodium citrate	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.5
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.6
nitrogen source	nitrogen source nitrite 0.5mM	+0.6
phage	P. put South MOI 1	+0.6
phage	P. putida South MOI 1	+0.6
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+0.6
pH	pH 9	+0.6
temperature shift	Temperature shift 10_to_30; with MOPS	+0.6
phage	P. put South MOI 0.1	+0.6
pH	Valerolactone (C) pH 6.5	+0.6
phage	PUT8 MOI 0.1	+0.6
phage	PUT 8 MOI 1	+0.6
nitrogen source	D-2-Aminobutyric (N)	+0.7
phage	P. put South MOI 0.1	+0.7
phage	P. putida Sci Big MOI 0.1	+0.8
carbon source	1,3-Butandiol (C)	+0.8
phage	P. putida Missley MOI 0.1	+0.8
phage	P. putida Sci small MOI 0.1	+0.9
phage	P. putida PUT 7 MOI 1	+1.0
		remove PP_1962