Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_1907
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-1.2
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.1
phage	P. putida Sci Big MOI 0.1	-1.0
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.9
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	-0.9
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.8
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-0.8
carbon source	Delta-Dodecalactone (C)	-0.8
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.8
nitrogen source	DL-2-Aminobutyric (N)	-0.7
carbon source	Tween 20 (C)	-0.7
nitrogen source	2,6-diaminopimelic (N)	-0.7
reactor	72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v oleyl alcohol overlay	-0.7
pH	Growth at pH9 and (C) D-Glucose	-0.7
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.7
nitrogen source	Urea (N)	-0.7
nitrogen source	DL-2-Aminobutyric (N)	-0.7
pH	Growth at pH6 and (C) Trisodium citrate	+0.7
carbon source	ferulate (C); with MOPS	+0.7
stress	Growth with Chloride 200 mM	+0.7
carbon source	carbon source Bisabolol 45 mM	+0.7
carbon source	Trisodium citrate (C)	+0.7
pH	pH 8	+0.7
carbon source	carbon source 3-O-methyl-glucose 10 mM	+0.7
phage	P. put PUT 10 MOI 10	+0.7
pH	pH 5	+0.8
carbon source	carbon source 3-O-methyl-glucose 50 mM	+0.9
carbon source	carbon source Bisabolene 48.9 mM	+0.9
pH	pH 9	+0.9
pH	pH 6	+1.0
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