Fitness for 1 genes in Pseudomonas putida KT2440

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Group	Condition	PP_1897
carbon source	Valeric (C)	-0.7
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	-0.5
carbon source	1,3-Butandiol (C)	-0.5
stress	Growth with Chloride 500 mM; with MOPS	-0.5
pH	Growth at pH9 and (C) Trisodium citrate	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.5
carbon source	L-Lysine 10 mM (C)	-0.4
stress	R2A with Polymyxin B sulfate 0.001 mg/ml	-0.4
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.4
nitrogen source	2,6-diaminopimelic (N)	-0.4
temperature shift	Temperature shift 30_to_21; with MOPS	-0.4
carbon source	D-Lysine 10 mM (C)	-0.4
temperature	Growth at 30C; with MOPS	-0.4
stress	Growth with Chloride 200 mM	-0.3
phage	P. putida Sci small MOI 0.1	-0.3
phage	P. put PUT 10 MOI 0.1	-0.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.3
temperature shift	Temperature shift 10_to_30; with MOPS	-0.3
carbon source	carbon source 2-Deoxy-D-glucose 50 mM	+0.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.4
temperature	Growth at 34C	+0.4
micoeukaryotes	Tetrahymena sp., Mixed culture-2	+0.4
carbon source	D-Glucose (C) with 20AA_mix_minus_Met	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	+0.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	+0.4
carbon source	ferulate (C); with MOPS	+0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	+0.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.4
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