Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_1893
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days	-0.6
pH	Growth at pH6 and (C) D-Glucose	-0.4
phage	P. putida Missley MOI 0.1	-0.4
carbon source	Crotonic (C)	-0.4
carbon source	Quinic Acid (C)	-0.3
reactor	24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO.	-0.3
nitrogen source	nitrogen source nitrite 1mM	-0.3
no stress control	Growth with no stress	-0.3
nitrogen source	2,6-diaminopimelic (N)	-0.3
r2a control with 0.2% methanol	R2A control with 0.2% methanol	+0.3
carbon source	L-Glutamic (C)	+0.3
carbon source	D-Glucose (C); with MOPS	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.3
stress	R2A with Polymyxin B sulfate 0.001 mg/ml	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.3
carbon source	L-Leucine (C)	+0.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.3
nitrogen source	nitrogen source nitrate 5mM	+0.3
temperature shift	Temperature shift 10_to_25; with MOPS	+0.3
pH	Growth at pH7 and (C) Trisodium citrate	+0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.4
nitrogen source	nitrate (N)	+0.4
carbon source	L-Leucine (C)	+0.4
carbon source	Butyl stearate (C)	+0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.4
stress	R2A with Fusaric 480 ug/mL	+0.4
stress	R2A with Fusaric 120 ug/mL	+0.5
carbon source	4-Hydroxyvalerate (C) (40mM)	+0.5
carbon source	4-Hydroxyvalerate (C) (40mM)	+0.7
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