Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_1874
phage	P. putida Sci small MOI 0.1	-1.6
pH	Growth at pH7 and (C) D-Glucose	-1.4
temperature	Growth at 30C; with MOPS	-1.1
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-1.0
carbon source	butyrate (C)	-0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.8
carbon source	4-Methyl-2-oxopentanoic (C)	-0.8
micoeukaryotes	Tetrahymena sp., Mixed culture-2	-0.7
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.7
pH	Growth at pH6 and (C) D-Glucose	-0.7
phage	PUT 8 MOI 1	-0.7
temperature shift	Temperature shift 30_to_25; with MOPS	-0.6
temperature shift	Temperature shift 10_to_30; with MOPS	-0.6
temperature shift	Temperature shift 10_to_34; with MOPS	-0.6
reactor	72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO.	-0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.5
carbon source	D-Lysine 10 mM (C)	-0.5
carbon source	L-Phenylalanine 5 mM (C)	-0.5
carbon source	3-Methyl-2-Oxobutanoic Acid (C)	-0.5
reactor	24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO.	-0.5
pH	Growth at pH9 and (C) D-Glucose	-0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	-0.5
temperature shift	Temperature shift 30_to_34; with MOPS	-0.5
temperature shift	Temperature shift 10_to_34; with MOPS	-0.5
phage moi 100	Time6-phageFRS	-0.5
reactor	72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO.	-0.5
nitrogen source	Urea (N)	-0.5
phage	P. putida PUT10 MOI 10	+0.5
nitrogen source	D-2-Aminobutyric (N)	+0.6
pH	pH 9	+0.6
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