Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_1845
carbon source	Oleic (C)	-3.4
carbon source	Oleic (C)	-2.1
nitrogen source	nitrogen source nitrite 1mM	-2.0
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.8
carbon source	carbon source D-Glucose 55.5 mM	-1.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-1.5
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-1.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-1.5
carbon source	Valeric (C)	-1.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-1.5
pH	pH 6	-1.4
pH	Growth at pH6 and (C) Trisodium citrate	-1.4
carbon source	Lignin Monomers (C)	-1.4
temperature	Growth at 25C; with MOPS	-1.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.2
stress	Growth with Chloride 500 mM; with MOPS	-1.2
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-1.2
temperature	Growth at 30C; with MOPS	-1.2
carbon source	3-methyl-3-butenol (C)	-1.1
temperature shift	Temperature shift 10_to_25; with MOPS	-1.1
nitrogen source	2,6-diaminopimelic (N)	-1.1
temperature shift	Temperature shift 30_to_21; with MOPS	-1.1
pH	Growth at pH7 and (C) Trisodium citrate	-1.1
carbon source	3-methyl-3-buten-1-ol 0.1 vol% (C)	-1.1
pH	pH 5	-1.0
stress	Growth with Chloride 500 mM; with MOPS	-1.0
pH	Growth at pH7 and (C) Trisodium citrate	+1.0
carbon source	Delta-Nonalactone (C)	+1.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+1.4
micoeukaryotes	Tetrahymena sp., Mixed culture-2	+1.6
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