Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_1844
nitrogen source Propandiamine (N) -1.3
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -1.1
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -0.9
nitrogen source Ammonium chloride (N) -0.8
pH Growth at pH7 and (C) D-Glucose -0.7
stress NaCl stress 250 mM -0.7
temperature Growth at 30C; with MOPS -0.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.7
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Phenylalanine 5 mM -0.7
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.6
carbon source L-Phenylalanine 5 mM (C) -0.6
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Phenylalanine 5 mM -0.6
toxin pUC18_phdP1_pSU18T_docP1 -0.6
pH Growth at pH9 and (C) Trisodium citrate -0.6
stress Growth with Chloride 500 mM; with MOPS +0.6
phage P. putida South MOI 1 +0.6
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.6
phage P. put South MOI 1 +0.7
carbon source D-Glucose (C); with MOPS +0.7
pH Growth at pH6 and (C) Trisodium citrate +0.7
phage PUT8 MOI 0.1 +0.7
pH Growth at pH9 and (C) Trisodium citrate +0.7
carbon source Levulinic Acid (C) +0.7
phage P. put South MOI 0.1 +0.7
carbon source 3-methyl-1-butanol 0.25 vol% (C) +0.8
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8
r2a control with 0.2% methanol R2A control with 0.2% methanol +0.8
phage P. putida PUT10 MOI 1 +0.8
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.9
phage PUT 8 MOI 1 +1.1
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PP_1844