Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_1817
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	-1.2
carbon source	ferulate (C); with MOPS	-1.0
temperature shift	Temperature shift 30_to_21; with MOPS	-0.9
temperature shift	Temperature shift 10_to_25; with MOPS	-0.8
pH	Growth at pH9 and (C) D-Glucose	-0.7
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.7
no stress control	Growth with no stress	-0.7
nitrogen source	nitrogen source nitrite 0.5mM	-0.7
phage	P. putida Sci Big MOI 0.1	-0.7
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.6
r2a control with 0.2x vogels	R2A control with 0.2X Vogels	-0.6
phage	P. putida Sci small MOI 0.1	-0.6
phage	P. put South MOI 0.1	-0.6
carbon source	L-Phenylalanine 5 mM (C)	-0.6
pH	Growth at pH6 and (C) Trisodium citrate	-0.6
phage	PUT8 MOI 0.1	-0.6
pH	pH 9	-0.6
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	-0.6
nophagecontrol	TIme6-nophage	-0.6
carbon source	5-Hydroxydodecanoate (C)	-0.6
r2a control with 0.2x vogels	R2A control with 0.2X Vogels	+0.6
carbon source	Valerolactone (C)	+0.6
carbon source	Valerolactone (C)	+0.6
stress	R2A with Polymyxin B sulfate 0.001 mg/ml	+0.6
phage	P. putida PUT10 MOI 1	+0.7
nitrogen source	D-2-Aminobutyric (N)	+0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.9
nitrogen source	2,6-diaminopimelic (N)	+1.0
		remove PP_1817