Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_1755
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-1.2
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.9
micoeukaryotes	Tetrahymena sp., Mixed culture-2	-0.7
carbon source	ferulate (C); with MOPS	-0.7
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	-0.6
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.6
micoeukaryotes	Acanthamoeba sp., muxed culture-1	-0.5
stress	Growth with Chloride 500 mM; with MOPS	+0.5
carbon source	carbon source 4-vinylphenol 0.1 mM	+0.5
pH	pH 7	+0.5
nitrogen source	2,6-diaminopimelic (N)	+0.6
stress	Growth with Chloride 200 mM; with MOPS	+0.6
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.6
carbon source	Valerolactone (C)	+0.6
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+0.6
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	+0.6
carbon source	Valerolactone (C)	+0.7
pH	Growth at pH6 and (C) D-Glucose	+0.7
carbon source	carbon source Bisabolol 45 mM	+0.7
pH	pH 6	+0.7
carbon source	Lignin Monomers (C)	+0.7
pH	pH 5	+0.7
carbon source	carbon source 2-Deoxy-D-glucose 100 mM	+0.7
carbon source	carbon source Bisabolene 48.9 mM	+0.7
pH	pH 8	+0.7
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.8
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.8
pH	pH 9	+0.9
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