Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_1724
nitrogen source	D-2-Aminobutyric (N)	-0.5
dilutelb	LB 0.1x with 55.5 mM D-Glucose	-0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	-0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.4
no stress control	Growth with no stress	-0.4
stress	R2A with Fusaric 240 ug/mL	-0.4
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM	-0.4
temperature	Growth at 25C	-0.4
no stress control	Growth with no stress	-0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	-0.3
nitrogen source	Urea (N)	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.3
nitrogen source	nitrogen source nitrate 5mM	-0.3
carbon source	Myristic (C)	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.3
stress	MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM	+0.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	+0.3
carbon source	carbon source 2-Deoxy-D-glucose 50 mM	+0.3
carbon source	carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM	+0.3
phage	P. putida Sci Big MOI 0.1	+0.3
pH	Growth at pH6 and (C) D-Glucose	+0.4
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.4
pH	pH 9	+0.4
stress	Isobutyl alcohol 0.6 vol%	+0.4
pH	Growth at pH8 and (C) D-Glucose	+0.4
phage	PUT 8 MOI 1	+0.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.5
carbon source	ferulate (C); with MOPS	+0.5
phage	P. putida Sci small MOI 0.1	+0.5
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.6
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