Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_1721
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	-0.6
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.6
phage	P. putida Missley MOI 0.1	-0.5
pH	Growth at pH6 and (C) Trisodium citrate	-0.5
carbon source	D-Glucose (C)	-0.5
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM	-0.5
pH	D-Glucose (C) pH 7.5	-0.5
nitrogen source	Propiolactam (N)	-0.5
phage	P. putida Sci small MOI 0.1	-0.5
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.5
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-0.4
carbon source	1,3-Butandiol (C)	-0.4
temperature shift	Temperature shift 30_to_10; with MOPS	-0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.4
nitrogen source	nitrogen source nitrite 0.5mM	+0.4
temperature shift	Temperature shift 10_to_25; with MOPS	+0.4
stress	MOPS minimal media_Glucose20mM with Chloride 200 mM	+0.4
carbon source	carbon source 2-Deoxy-D-glucose 10 mM	+0.4
pH	Growth at pH9 and (C) Trisodium citrate	+0.4
pH	pH 9	+0.5
temperature shift	Temperature shift 10_to_21	+0.5
pH	pH 6	+0.5
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.5
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.5
micoeukaryotes	Tetrahymena sp., Mixed culture-2	+0.5
carbon source	carbon source 2-Deoxy-D-glucose 100 mM	+0.5
carbon source	carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM	+0.5
carbon source	carbon source 3-O-methyl-glucose 10 mM	+0.6
pH	pH 7	+0.8
		remove PP_1721