Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_1707
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.3
carbon source Valeric (C) -0.9
phage P. putida Missley MOI 0.1 -0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.8
carbon source Myristic (C) -0.8
temperature shift Temperature shift 30_to_21; with MOPS -0.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.6
carbon source 1,3-Butandiol (C) -0.5
carbon source L-Phenylalanine 5 mM (C) -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.5
stress Growth with Chloride 200 mM; with MOPS -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.5
nitrogen source Ammonium chloride (N); with MOPS -0.5
phage P. putida PUT 7 MOI 1 -0.5
carbon source carbon source D-Glucose 55.5 mM +0.5
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +0.5
carbon source carbon source 2-Deoxy-D-glucose 50 mM +0.5
phage P. put South MOI 0.1 +0.5
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.5
phage moi 100 Time6-phageFRS +0.5
carbon source carbon source 3-O-methyl-glucose 10 mM +0.5
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v dodecane overlay +0.5
carbon source carbon source Bisabolene 48.9 mM +0.5
pH pH 8 +0.6
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6
pH pH 6 +0.6
carbon source carbon source 2-Deoxy-D-glucose 100 mM +0.7
pH pH 9 +0.7
carbon source carbon source 3-O-methyl-glucose 50 mM +0.8
carbon source carbon source 4-vinylphenol 0.1 mM +0.8
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PP_1707