Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_1686
nitrogen source NAG (N); with MOPS -0.8
nitrogen source Ammonium chloride (N) -0.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.5
carbon source D-Glucose (C) 10 mM -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.4
carbon source D-Glucose (C) -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.4
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4
pH Growth at pH9 and (C) Trisodium citrate -0.4
temperature Growth at 30C -0.4
carbon source 1,3-Butandiol (C) -0.4
temperature Growth at 25C; with MOPS -0.4
carbon source D-Glucose (C) with 20AA_mix_minus_Cys -0.4
no phage control no phage control -0.3
no phage control Time6-nophage -0.3
carbon source Nonanoic (C) -0.3
nitrogen source nitrite (N) -0.3
carbon source ferulate (C); with MOPS -0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.3
r2a control with 0.2% methanol R2A control with 0.2% methanol +0.3
carbon source carbon source 4-vinylphenol 0.1 mM +0.3
stress R2A with Polymyxin B sulfate 0.001 mg/ml +0.3
phage PUT 8 MOI 1 +0.3
nitrogen source Propandiamine (N) +0.4
stress R2A with Fusaric 240 ug/mL +0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6
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PP_1686