Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_1661
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.5
micoeukaryotes Tetrahymena sp., Mixed culture-2 -0.4
phage P. putida Sci Big MOI 0.1 -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.4
pH Growth at pH6 and (C) Trisodium citrate -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.4
carbon source carbon source 4-vinylphenol 0.01 mM -0.4
nitrogen source Propandiamine (N) -0.4
pH Growth at pH6 and (C) Trisodium citrate -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.3
phage P. putida Sci small MOI 0.1 -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3
stress NaCl stress 250 mM -0.3
temperature shift Temperature shift 10_to_34; with MOPS +0.3
temperature shift Temperature shift 30_to_25; with MOPS +0.3
carbon source Myristic (C) +0.3
carbon source Tween 20 (C) +0.3
carbon source Ethyl decanoate and D-Glucose (C)s +0.3
carbon source D-Glucaric (C) +0.3
carbon source 2-Methylbutanoic (C) +0.3
nitrogen source NAG (N); with MOPS +0.3
pH Valerolactone (C) pH 6.5 +0.4
carbon source Valerolactone (C) +0.4
temperature shift Temperature shift 10_to_25; with MOPS +0.4
nitrogen source 2,6-diaminopimelic (N) +0.4
reactor 48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO. +0.4
carbon source carbon source D-Glucose 55.5 mM +0.4
reactor 24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. +0.5
no stress control Growth with no stress +0.5
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PP_1661