Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_1645
nitrogen source Propandiamine (N) -1.2
micoeukaryotes Tetrahymena sp., Mixed culture-2 -1.1
nitrogen source Ammonium chloride and TNT (N) -1.1
stress Geraniol 1 vol% -1.0
nitrogen source D-2-Aminobutyric (N) -1.0
nitrogen source Ammonium chloride and TNT (N) -0.9
nitrogen source Ammonium chloride and TNT (N) -0.9
carbon source L-Leucine (C) -0.8
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.8
carbon source Delta-Undecalactone (C) -0.8
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. -0.7
lb outgrowth control LB outgrowth control -0.7
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.7
carbon source Trisodium citrate 10 mM (C) -0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7
micoeukaryotes Dictyostellum sp.mixed culture-1 -0.7
nitrogen source nitrogen source nitrite 1mM -0.7
nitrogen source Ammonium chloride and TNT (N) -0.7
micoeukaryotes Acanthamoeba sp., muxed culture-1 -0.7
lb outgrowth control LB outgrowth control -0.6
nitrogen source TNT (N) -0.6
pH Growth at pH7 and (C) D-Glucose -0.6
temperature shift Temperature shift 30_to_21; with MOPS +0.6
stress R2A with Polymyxin B sulfate 0.001 mg/ml +0.6
pH pH 8 +0.6
phage P. putida PUT10 MOI 0.1 +0.7
phage PUT8 MOI 0.1 +0.8
phage P. putida PUT10 MOI 1 +0.9
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PP_1645