Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_1631
phage P. put PUT 10 MOI 0.1 -0.6
nitrogen source NAG (N); with MOPS -0.6
carbon source Valerolactone (C) -0.6
carbon source Tween 20 (C) -0.6
r2a control with 0.2x vogels R2A control with 0.2X Vogels -0.6
phage P. putida PUT10 MOI 10 -0.5
phage PUT8 MOI 0.1 -0.5
phage P. put South MOI 1 -0.5
phage P. putida PUT 7 MOI 1 -0.5
nitrogen source 2,6-diaminopimelic (N) -0.5
nitrogen source 2,6-diaminopimelic (N) -0.5
phage P. putida South MOI 0.1 -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.4
r2a control with 0.2x vogels R2A control with 0.2X Vogels +0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.4
temperature shift Temperature shift 10_to_25; with MOPS +0.4
pH Growth at pH8 and (C) D-Glucose +0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.5
temperature shift Temperature shift 30_to_25; with MOPS +0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.5
carbon source ferulate (C); with MOPS +0.5
r2a control R2A control +0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.5
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.5
carbon source Delta-Decalactone (C) +0.6
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.6
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6
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PP_1631