Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_1611
carbon source D-Mannose (C) -0.9
reactor_pregrowth Adaptation in M9 media timecourse 4; day 3 -0.7
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.7
pH pH 5 -0.6
carbon source L-Leucine (C) -0.6
carbon source D-Fructose (C) -0.6
carbon source L-Alanine (C) -0.6
carbon source Myristic (C) -0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.6
nitrogen source L-Leucine (N) -0.6
temperature shift Temperature shift 30_to_25; with MOPS -0.6
temperature shift Temperature shift 30_to_10; with MOPS -0.6
stress MOPS minimal media_Glucose20mM with Lithium chloride 200 mM -0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.6
nitrogen source DL-2-Aminobutyric (N) -0.6
carbon source L-Leucine (C) -0.6
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM -0.5
carbon source carbon source Glycerol 108.6 mM -0.5
stress Butanol 0.6 vol% -0.5
temperature shift Temperature shift 30_to_21; with MOPS -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.5
nitrogen source nitrite (N) -0.5
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM -0.5
carbon source Valerolactone (C) +0.5
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v dodecane overlay +0.5
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.7
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.7
phage P. putida Sci Big MOI 0.1 +0.8
micoeukaryotes C.elegans, mixed culture-2 +0.8
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PP_1611