Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_1481
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.9
phage	P. putida South MOI 10	-0.9
carbon source	carbon source 2-Deoxy-D-glucose 10 mM	-0.7
carbon source	D-Glucose (C); with MOPS	-0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.7
stress	R2A with Fusaric 240 ug/mL	-0.6
pH	Growth at pH6 and (C) Trisodium citrate	-0.6
pH	Growth at pH7 and (C) Trisodium citrate	-0.6
nitrogen source	nitrogen source nitrite 1mM	-0.6
carbon source	carbon source 3-O-methyl-glucose 50 mM	-0.6
temperature shift	Temperature shift 10_to_25; with MOPS	-0.6
carbon source	butyrate (C)	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.5
temperature shift	Temperature shift 30_to_25; with MOPS	-0.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.5
stress	MOPS minimal media_Glucose20mM with PHB-HV-HH 0.1 mg/mL	-0.5
nitrogen source	nitrate (N)	-0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	-0.5
carbon source	DL-2-Aminoadipic 10 mM (C)	-0.5
phage	P. putida Missley MOI 0.1	-0.5
pH	Growth at pH9 and (C) Trisodium citrate	-0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	+0.5
phage	P. putida Sci small MOI 0.1	+0.5
nitrogen source	D-2-Aminobutyric (N)	+0.5
carbon source	2-Keto-D-gluconic hemicalcium salt (C)	+0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs	+0.5
pH	Growth at pH6 and (C) D-Glucose	+0.5
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.6
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