Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_1414
pH	pH 6	-0.5
carbon source	carbon source D-Glucose 55.5 mM	-0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.4
carbon source	carbon source 3-O-methyl-glucose 10 mM	-0.4
phage	P. putida Missley MOI 0.1	-0.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	-0.3
carbon source	5-Aminovaleric 10 mM (C)	-0.3
carbon source	D-Lysine 10 mM (C)	-0.3
carbon source	carbon source 3-O-methyl-glucose 50 mM	-0.3
phage	PUT8 MOI 0.1	-0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.3
nitrogen source	Hippuric (N)	-0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	-0.2
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.2
pH	Growth at pH6 and (C) Trisodium citrate	-0.2
pH	Growth at pH9 and (C) D-Glucose	-0.2
phage	P. putida South MOI 0.1	-0.2
carbon source	carbon source 4-vinylphenol 0.01 mM	-0.2
phage	PUT8 MOI 10	-0.2
carbon source	3-Hydroxypropionate (C)	+0.2
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs	+0.2
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	+0.2
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM	+0.3
temperature shift	Temperature shift 30_to_25; with MOPS	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.3
carbon source	D-Glucose (C); with MOPS	+0.3
nitrogen source	Propandiamine (N)	+0.3
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.3
carbon source	ferulate (C); with MOPS	+0.3
carbon source	Delta-Decalactone (C)	+0.3
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